Frankenstein

Remember me, remember me, but ah! forget my fate (Dido’s Lament, Henry Purcell)

A Voronoi diagram divides a plane based on a set of original points. Each polygon, or Voronoi cell, contains an original point and all that are closer to that point than any other.

This is a nice example of a Voronoi tesselation. You can find good explanations of Voronoi diagrams and Delaunay triangulations here (in English) or here (in Spanish).

A grayscale image is simply a matrix where darkness of pixel located in coordinates (i, j) is represented by the value of its corresponding element of the matrix: a grayscale image is a dataset. This is a Voronoi diagraman of Frankenstein:

To do it I followed the next steps:

  1. Read this image
  2. Convert it to gray scale
  3. Turn it into a pure black and white image
  4. Obtain a random sample of black pixels (previous image corresponds to a sample of 6.000 points)
  5. Computes the Voronoi tesselation

Steps 1 to 3 were done with imager, a very appealing package to proccess and analice images. Step 5 was done with deldir, also a convenient package which computes Delaunay triangulation and the Dirichlet or Voronoi tessellations.

The next grid shows tesselations for sample size from 500 to 12.000 points and step equal to 500:

I gathered all previous images in this gif created with magick, another amazing package of R I discovered recently:

This is the code:

library(imager)
library(dplyr)
library(deldir)
library(ggplot2)
library(scales)

# Download the image
file="http://ereaderbackgrounds.com/movies/bw/Frankenstein.jpg"
download.file(file, destfile = "frankenstein.jpg", mode = 'wb')

# Read and convert to grayscale
load.image("frankenstein.jpg") %>% grayscale() -> x

# This is just to define frame limits
x %>% 
  as.data.frame() %>% 
  group_by() %>% 
  summarize(xmin=min(x), xmax=max(x), ymin=min(y), ymax=max(y)) %>% 
  as.vector()->rw

# Filter image to convert it to bw
x %>%
  threshold("45%") %>% 
  as.cimg() %>% 
  as.data.frame() -> df

# Function to compute and plot Voronoi tesselation depending on sample size
doPlot = function(n)
{
  #Voronoi tesselation
  df %>% 
  sample_n(n, weight=(1-value)) %>% 
  select(x,y) %>% 
  deldir(rw=rw, sort=TRUE) %>% 
  .$dirsgs -> data

  # This is just to add some alpha to lines depending on its longitude
  data %>% 
    mutate(long=sqrt((x1-x2)^2+(y1-y2)^2),
         alpha=findInterval(long, quantile(long, probs = seq(0, 1, length.out = 20)))/21)-> data

  # A little bit of ggplot to plot results
  data %>% 
    ggplot(aes(alpha=(1-alpha))) +
    geom_segment(aes(x = x1, y = y1, xend = x2, yend = y2), color="black", lwd=1) +
    scale_x_continuous(expand=c(0,0))+
    scale_y_continuous(expand=c(0,0), trans=reverse_trans())+
    theme(legend.position  = "none",
            panel.background = element_rect(fill="white"),
            axis.ticks       = element_blank(),
            panel.grid       = element_blank(),
            axis.title       = element_blank(),
            axis.text        = element_blank())->plot

return(plot)
}

# I call the previous function and store resulting plot in jpeg format
i=5000
name=paste0("frankie",i,".jpeg")
jpeg(name, width = 600, height = 800, units = "px", quality = 100)
doPlot(i)
dev.off()

# Once all images are stored I can create gif
library(magick)
frames=c()
images=list.files(pattern="jpeg")

for (i in length(images):1)
{
  x=image_read(images[i])
  x=image_scale(x, "300")
  c(x, frames) -> frames
}
animation=image_animate(frames, fps = 2)
image_write(animation, "Frankenstein.gif")

20 thoughts on “Frankenstein

    1. Thanks. The key is using images with high contrast. I think your image can work. Play with threshold. Good luck!

  1. Fun post, thanks for taking the time to write and share it!

    One note though: unless I’m mistaken, I think you forgot a for loop in your published code for the lines 58-62.

  2. Wonderful post.
    I guess you could get some sort of ‘average’ or transformed colour for each polygon using the original image.

  3. What an unfortunate name for a package (deldir). First thing I thought when I saw that was “why a tool to remove an entire directory from my hard drive?” 🙂

  4. Very cool and insightful analysis!

    I have one question, though: after copying and pasting the code provided in this article, I received an error, because R could not find the ‘value’ object from the doPlot() function that you wrote.

    I read your example a couple of times, but the contents of the value object are not specified. Using value = seq(0, 1, length.out = nrow(df)) inside the doPlot() function, I could at least recreate the analysis, but it resulted in an image that looks inverted (compared to your result).

    So, what values do you use for the value object?

    Thanks in advance!

    1. What is the answer to this question? I am also trying to reproduce the example above, but cannot seem to get the right value for `value`. Thank you!

Leave a Reply

Your email address will not be published. Required fields are marked *